Publications
2022-2023
- Gossner, M.M.; Perret-Gentil, A.; Britt, E.; Queloz, V.; Glauser, G.; Ladd, T.; Roe, A.D.; Cleary, M.; Liziniewicz, M.; Nielsen, L.R.; Ghosh, S.K.; Bonello, P.; Eisenring, M. 2023. A glimmer of hope – ash genotypes with increased resistance to ash dieback pathogen show cross-resistance to emerald ash borer” New Phytologist (2023).
- Peterson, D.L., Kyle, K., Sallé, A., Pecori, F., Migliorini, D., Santini, A., Luchi, N. and Cleary, M., 2023. Specificity and Sensitivity of a Rapid LAMP Assay for Early Detection of Emerald Ash Borer (Agrilus planipennis) in Europe. Forests, 14(2), p.436.
- Blomquist, M., Cleary, M., Sherwood, P., Pinto, W., Herrera, S. L., Marčiulynienė, D., … & Rönnberg, J. (2023). The potential of biological control against Heterobasidion root rot is not realized in practical forestry. Forest Ecology and Management, 531, 120778.
- Matsiakh, I., and Menkis, A., 2023. An Overview of Phytophthora Species on Woody Plants in Sweden and Other Nordic Countries. Microorganisms, 11(5), p.1309.
- Franić, I., Allan, E., Prospero, S., Adamson, K., Attorre, F., Auger-Rozenberg, M.A., Augustin, S., Avtzis, D., Baert, W., Barta, M. and Bauters, K., Cleary, M., 2023. Climate, host and geography shape insect and fungal communities of trees. Scientific reports, 13(1), p.11570.
- Hulbert, J.M., Hallett, R.A., Roy H.E., Cleary, M. 2023. Citizen science can enhance strategies to detect and manage invasive forest pests and pathogens. Frontiers in Ecology and Evolution.
- Youssef, K., Dambrauskaite, M., Witzell, J. and Rönnberg, J., 2023. Survey Study Reveals High Prevalence of Heterobasidion Root Rot Infection in Scots Pine (Pinus sylvestris) Stands Established on Seemingly Low-Risk Sites. Forests, 14(5), p.1018.
- van der Nest, A., Wingfield, M.J., Sadiković, D., Mullett, M.S., Marçais, B., Queloz, V., Adamčíková, K., Davydenko, K. and Barnes, I., 2023. Population structure and diversity of the needle pathogen Dothistroma pini suggests human-mediated movement in Europe. Frontiers in Genetics, 14, p.1103331.
- Nordström, I., Sherwood, P., Bohman, B., Woodward, S., Peterson, D.L., Niño-Sánchez, J., Sánchez-Gómez, T., Díez, J.J. and Cleary, M., 2022. Utilizing volatile organic compounds for early detection of Fusarium circinatum. Scientific Reports, 12(1), p.21661.
- Marčiulynienė, D., Marčiulynas, A., Mishcherikova, V., Lynikienė, J., Gedminas, A., Franic, I. and Menkis, A., 2022. Principal Drivers of Fungal Communities Associated with Needles, Shoots, Roots and Adjacent Soil of Pinus sylvestris. Journal of Fungi, 8(10), p.1112.
- Tubby, K.V., Adamcikova, K., Adamson, K., Akiba, M., Barnes, I., Boroń, P., Bragança, H., Bulgakov, T., Burgdorf, N., Capretti, P., Cech, T., Cleary, M., Davydenko, K., Drenkhan, R., Elvira-Recuenco, M., Enderle, R., Gardner, J., Georgieva, M., Ghelardini, L., Husson, C., Iturritxa, E., Vester, M., Markovskaja, S., Mesanza, N., Ogris, N., Oskay, F., Piškur, B., Queloz, V., Raitelaitytė, K., Raposa, R., Soukainen, M., Strasser, L., Vahalík, P., Mullett, M. 2022. The increasing threat to European forests from the invasive foliar pine pathogen, Lecanosticta acicola.
- Laas, M., Adamson, K., Barnes, I., Janoušek, J., Mullett, M.S., Adamčíková, K., Akiba, M., Beenken, L., Braganca, H., Bulgakov, T.S., Capretti, P., Cech, T., Cleary, M., Enderle, R., Ghelardini, L., Jankovský, L., Markovskaja, S., Matsiakh, I., Meyer, J.B., Oskay, F., Piškur, B., Raitelaitytė, K., Sadiković, D., Drenkhan, R. 2022. Diversity, migration routes, and worldwide population genetic structure of Lecanosticta acicola, the causal agent of brown spot needle blight. Molecular Plant Pathology, 23, 1620– 1639.
- Morrison, D.J.; Rönnberg, J.; Pellow, K.; Cleary, M. 2022. Mortality and growth following precommercial thinning in stands affected by Armillaria, Phellinus and Tomentosus root diseases in southern British Columbia. Forest Ecology and Management.
- Witzell, J., Decker, V.H.G., Agostinelli, M., Romeralo, C., Cleary, M., Albrectsen, B.R. 2022. Aspen Leaves as a “Chemical Landscape” for Fungal Endophyte Diversity—Effects of Nitrogen Addition. Frontiers in Microbiology. 13, 846208.
- Oskay, F., Vettraino, A.M., Doğmuş, H.T., Lehtijärvi, A., Woodward, S., Cleary, M.; 2022. Seed quantity affects the fungal community composition detected using metabarcoding. Scientific Reports 12, 3060 (2022). https://doi.org/10.1038/s41598-022-06997-9
- Kourantidou, M., Verbrugge, L.N.H., Haubrock, P.J., Cuthbert, R.N., Angulo, E., Ahonen, I., Cleary, M., Falk-Andersson, J., Granhag, L., Gíslason, S., Kaiser, B., Kosenius, A-K., Lange, H., Lehtiniemi, M:, Magnussen, K:, Navrud, S., Nummi, P., Oficialdegui, F.J., Ramula, S., Ryttäri, T., von Schmalensee, M., Stefansson, R.A., Diagne, C., Courchamp, F. 2022. The economic costs, management and regulation of biological invasions in the Nordic countries: A review. Ambio. 324, 116374
- Liziniewicz, M., Tolio, B., & Cleary, M. (2022). Monitoring of long‐term tolerance of European ash to Hymenoscyphus fraxineus in clonal seed orchards in Sweden. Forest Pathology, 52(5), e12773.
- Franić, I., Prospero, S. Adamson, K., Allan, E., Auger-Rozenberg, M-A., Augustin, S., Avtzis, D., Barta, M., Boroń, P., Bragança, H., Brestovanská, T., Burgess, T., Burokienė, D., Černý, K., Cleary, M., Corley, J., Coyle, D.R., Csóka, G., Davydenko, K., Elsafy, M.A.O., Eötvös, C., de Groot, M., Diez, J.J., Doğmuş Lehtijärvi, H.T., Drenkhan, R., Fan, J-T., Grabowski, M., Grad, B., Havrdova, L., Hrabetova, M., Iede, E.T., Kacprzyk, M., Kenis, M., Kirichenko, N., Lacković, N., Lazarević, J., Leskiv, M., Li, H., Madsen, C.L., Matošević, D., Matsiakh, I., Meffert, J., Migliorini, D., Mikó, A., Nikolov, C., O’Hanlon, R., Oskay, F., Paap, T., Parpan, T., Petrakis, P.V., Piškur, B., Ravn, H.P., Ronse, A., Roques, A., Schühli, G.S., Sivickis, K., Talgø, V., Tomoshevich, M., Uimari, A., Ulyshen, M., Vettraino, A.M., Villari, C., Wang, Y., Witzell, J., Zlatković, M., Eschen. R., 2022. Worldwide diversity of endophytic fungi and herbivorous insects associated with dormant tree twigs. Scientific Data. 9, 62 (2022).
2020-2021
- Cleary, M., Blomquist, M., Marchand, M., Witzell, J. 2021. Oomycetes in rhizosphere soil of ornamental plants from retail nurseries in Southern Sweden. Forest Pathology.
- Felton, A., Felton. A.M., Wam, H.K., Witzell, J., Wallgren, M., Löf, M., Sonesson, J., Lindbladh, M., Björkman, C., Blennow, K., Cleary, M., Jonsell, M., Klapwijk, M.J., Niklasson, M., Petersson, L., Rönnberg, J., Ode Sang, Å., Wrethling, F., Hedwall, P-O. 2021. Forest biodiversity and ecosystem services outcomes from spruce-birch mixtures in Fennoscandia: The potential importance of tree spatial arrangement. Environmental Challenges.
- Roos, A., Blomquist, M., Bhatia, R., Ekegren, K., Rönnberg, J., Torfgård, L., & Tunberg, M. (2021). The digitalisation of the Nordic bioeconomy and its effect on gender equality. Scandinavian Journal of Forest Research, 36(7-8), 639-654.
- Cleary, M., Morrison, D.J., van der Kamp, B. 2021. Symptom development and mortality rates caused by Armillaria ostoyae in juvenile mixed conifer stands in British Columbia’s southern interior. Forest Pathology. 2021;51:e12675.
- Matsiakh I., Kramarets V., Cleary M. 2021. Occurrence and diversity of Phytophthora species in declining broadleaf forests in western Ukraine. Forest Pathology, 51(1), e12662.
- Benavent-Celma Clara, Lopez-García N., Ruba T., Scislak M. E., Street-Jones D., Van West P., Woodward S., Witzell J. 2021. Current practices and emerging possibilities forreducing the spread of oomycete pathogens interrestrial and aquatic production systems in the European Union. Fungal Biology Reviews.
- Zaluma, A., Sherwood, P., Bruna, L., Skola, U., Gaitnieks, T. and Rönnberg, J., 2021. Control of Heterobasidion in Norway spruce stands: The impact of stump cover on efficacy of urea and Phlebiopsis gigantea and implications for forest management. Forests, 12(6), p.679.
- Agostinelli, M., Nguyen, D., Witzell, J., Cleary, M. 2021 Mycobiome of Fraxinus excelsior with different phenotypic susceptibility to ash dieback. Frontiers in Forests and Global Change 4:580514.
- Elfstrand, M., Chen, J., Cleary, M., Halecker, S., Ihrmark, K:, Karlsson, M., Davydenko, K., Stenlid, J., Stadler, M., Brandström Durling, M. 2021. Comparative analyses of the Hymenoscyphus fraxineus and Hymenoscyphus albidus genomes reveals difference of transposable elements expansion between a pathogenic and a non-pathogenic fungus. BMC Genomics. 2021 Jul 4;22(1):503.
- Blomquist, M., Herrera, S.L., Hofmann, J., Beram, R.C., Cleary, M. and Rönnberg, J., 2020. Size matters but is big always better? Effectiveness of urea and Phlebiopsis gigantea as treatment against Heterobasidion on Picea abies stumps of variable size. Forest Ecology and Management, 462, p.117998.
- Drenkhan, R.; Ganley, B.; Martín-García, J.; Vahalík, P.; Adamson, K.; Adamčíková, K.; Ahumada, R.; Blank, L.; Bragança, H.; Capretti, P.; Cleary, M.; Cornejo, C.; Davydenko, K.; Diez, J.J.; Lehtijärvi, H.T.D.; Dvořák, M.; Enderle, R.; Fourie, G.; Georgieva, M.; Ghelardini, L.; Hantula, J.; Ioos, R.; Iturritxa, E.; Kanetis, L.; Karpun, N.N.; Koltay, A.; Landeras, E.; Markovskaja, S.; Mesanza, N.; Milenković, I.; Musolin, D.L.; Nikolaou, K.; Nowakowska, J.A.; Ogris, N.; Oskay, F.; Oszako, T.; Papazova-Anakieva, I.; Paraschiv, M.; Pasquali, M.; Pecori, F.; Rafoss, T.; Raitelaitytė, K.; Raposo, R.; Robin, C.; Rodas, C.A.; Santini, A.; Sanz-Ros, A.V.; Selikhovkin, A.V.; Solla, A.; Soukainen, M.; Soulioti, N.; Steenkamp, E.T.; Tsopelas, P.; Vemić, A.; Vettraino, A.M.; Wingfield, M.J.; Woodward, S.; Zamora-Ballesteros, C.; Mullett, M.S. Global Geographic Distribution and Host Range of Fusarium circinatum, the Causal Agent of Pine Pitch Canker. Forests 2020, 11, 724.
- Xu, X., Wang, W., Cleary, M., Wang, P., Lu, N., Sun, Y., Rönnberg, J. 2020. Slope position affects arbuscular mycorrhizal fungi (AMF) rather than thinning intensity in Chinese fir plantations. Forests 2020, 11(3), 273;
- Elvira-Recuenco, M.; Cacciola, S.O.; Sanz-Ros, A.V.; Garbelotto, M.; Aguayo, J.; Solla, A.; Mullett, M.; Drenkhan, T.; Oskay, F.; Aday Kaya, A.G.; Iturritxa, E.; Cleary, M.; Witzell, J.; Georgieva, M.; Papazova-Anakieva, I.; Chira, D.; Paraschiv, M.; Musolin, D.L.; Selikhovkin, A.V.; Varentsova, E.Y.; Adamčíková, K.; Markovskaja, S.; Mesanza, N.; Davydenko, K.; Capretti, P.; Scanu, B.; Gonthier, P.; Tsopelas, P.; Martín-García, J.; Morales-Rodríguez, C.; Lehtijärvi, A.; Doğmuş Lehtijärvi, H.T.; Oszako, T.; Nowakowska, J.A.; Bragança, H.; Fernández-Fernández, M.; Hantula, J.; Díez, J.J. 2020. Potential interactions between invasive Fusarium circinatum and other pine pathogens in Europe. Forests 2020, 11(1), 7;
- Põlme, S., Abarenkov, K., Nilsson, R.H., Lindahl, B., Clemmensen, K., Kauserud, H., Kjoller, H., Baldrian, P., Guldberg, T., Frøslev, R., Adojaan, K., Vizzini, A., Suija, A., Pfister, D., Baral, H-O, Järv, H., Madrid, H., Nordén, J., Liu, J-K, Pawlowska, J., Põldmaa, K., Pärtel, K., Runnel, K., Hansen, K., Hyde, K.D., Larsson, K-H, Sandoval-Denis, M., Smith, M-E, Toome-Heller, M., Wijayawardene, N.N., Menolli Jr., N.N., Reynolds, N.K., Drenkhan, R., Maharachchikumbura, S.N.S., Gibertoni, T.B., Læssøe, T., Davis, W., Tokarev, Y., Corrales, A., Mayra Soares, A., Agan, A., Argüelles- Moyao, A., Detherige, A., de Meiras-Ottoni, A., Machado, A.R., Verbeken, A., Cui, B., Marín, C., Stanton, D., Gohar, D., Wanasinghe, D.N., Otsing, E., Aslani, F., Griffith, G.W., Grossart, H-P, Masigol, H., Rojas-Jimenez, K., Timling, I., Hiiesalu, I., Mujica, M.I., Oja, J., Geml, J., Alvarez Manjarrez, J., Ilves, K., Loit, K., Adamson, K., Nara, K., Küngas, K., Biteneks, K., Irinyi, L., Nagy, L., Zhou, L-W., Varga, T., Wagner, L., Aime, M.C., Öpik, M., Metsoja, M., Ryberg, M., Vasar, M., Murata, M., Nelsen, M.P., Cleary, M., Samarakoon, M.C., Doilom, M., Bahram, M., Johnston, P., Kohout, P., Chen, Q., Amiri, R., dos Santos Chikowski, R., Mendez-Alvarenga, R-L., Perera, R., Orijel, R.G., Gielen, R., Phookamsak, R., Jayawardena, R.S., Rahimlou, S., Tibpromma, S., Brown, S.P., Sepp, S-K, Mundra, S., Luo, Z-H., Bose, T., Vahter, T., Netherway, T., Yang, T., Lumbsch, H.T., Tian, Q., May, T., Coimbra, V.R.M:, de Lima, V.X., de Oliviera, V.R.T., Lu, Y., Matsuda, Y., Miyamoto, Y., Li, W., Kõljalg, U., Tedersoo, L.. 202X. FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles. Fungal Diversity. 105, 1–16 (2020).
- Eshghi Sahraeil, S., Cleary, M., Stenlid, J., Brandström-Durling, M., Elfstrand, M. 2020. Transcriptional responses in developing lesions of European ash reveal genes responding to fungal infection by Hymenoscyphus fraxineus. BMC Plant Biology. 20:455
- Hultberg, T., Sandberg, J., Felton, A., Öhman, K., Witzell, J., Rönnberg, J., Cleary, M. Ash dieback risks an extinction cascade. Biological Conservation. Volume 244, April 2020, 108516
- Chaudhary, R., Rönneburg, T., Stein Åslund, M., Lundén, K., Brandström Durling, M., Ihrmark, K., Menkis, A., Stener, L-G., Elfstrand, M., Cleary, M., Stenlid, J. 2020. Marker-trait associations for tolerance to ash dieback in common ash. Forests 2020, 11(10), 1083;
2016-2019
- Cleary, M., F. Oskay, H. Tugba, S. Woodward, and A. M. Vettraino. 2019. Cryptic Risks to Forest Biosecurity Associated with the Global Movement of Commercial Seed. Forests 10:459.
- Cleary, M., Laas M., Oskay F., Drenkhan R. 2019. First report of Lecanosticta acicola on exotic Pinus mugo in southern Sweden. Forest Pathology. 2019;49:e12507.
- Zamora-Ballesteros, C.; Diez, J.J.; Martín-García, J.; Witzell, J.; Solla, A.; Ahumada, R.; Capretti, P.; Cleary, M.; Drenkhan, R.; Dvořák, M.; Elvira-Recuenco, M.; Fernández-Fernández, M.; Ghelardini, L.; Gonthier, P.; Hernández-Escribano, L.; Ioos, R.; Markovskaja, S.; Martínez-Álvarez, P.; Muñoz-Adalia, E.J.; Nowakowska, J.A.; Oszako, T.; Raposo, R.; Santini, A.; Hantula, J. 2019. Pine Pitch Canker (PPC): Pathways of Pathogen Spread and Preventive Measures. Forests 2019, 10(12), 1158;
- Vainio, E.J., Bragança, H., Cleary, M., Fourie, G., Georgieva, M., Ghelardini, L., Hannunen, S., Ioos, R., Martín-García, J., Martínez Álvarez, P. Mullett, M:, Oszako, T., Papazova –Anakieva, I., Piškur, B., Romeralo, C., Sanz-Ros, A-V., Steenkamp, E.T., Tubby, K., Wingfield, M.J., Diez, J.J. 2019. Sampling and detection strategies for the Pine Pitch Canker (PPC) disease pathogen Fusarium circinatum in Europe. Forests 2019, 10(9), 723;
- Fernández, M.M.; Naves, P.; Musolin, D.L.; Selikhovkin, A.V.; Cleary, M.; Chira, D.; Paraschiv, M.; Papazova-Anakieva, I.; Drenkhan, T.; Georgieva, M.; Altunisik, A.; Morales, C.; Tabaković-Tošić, M.; Avtzis, D.N.; Georgiev, G.; Doychev, D.; Nacheski, S.; Trestic, T.; Elvira-Recuenco, M.; Diez J.J., Witzell, J. 2019. Pitch canker disease and insects: Regional risks, environmental regulation and practical management options. Forests 2019, 10(8), 649;
- Felton, A., Petersson, L., Nilsson, O., Witzell, J., Cleary, M., Felton, A.M., Björkman, C., Ode Sang, Å., Jonsell, M., Holmström, E., Nilsson, U., Rönnberg, J., Kalén, C., Lindbladh, M. 2019. The tree species matters: Biodiversity and ecosystem service implications of replacing Scots pine production stands with Norway spruce. Ambio
- Morales-Rodríguez, C., Anslan, Sten., Auger-Rozenberg, M., Augustin, S., Baranchikov, Y., Bellahirech, A., Burokiene, D., Cepukoit, D., Çota, E., Davydenko, K., Doğmuş-Lehtijärvi, T., Drenkhan, R., Drenkhan, T., Eschen, R., Glavendekić, M., de Groot, M., Kacprzyk, M., Kenis, M., Kirichenko, N., Matsiakh, I., Musolin, D. L., Nowakowsa, J. A., O’Hanlon, R., Prospero, S., Roques A., Santini, A., Talgø, V., Tedersoo, L., Uimari, A., Vannini, A., Witzell, J., Woodward, S., Zambounis, A., and Cleary, M. 2019 Forewarned is forearmed: preventive detection of potentially invasive pests and pathogens in sentinel plantings. Neobiota. 47: 95-123.
- Cleary, M., Oskay, F., Rönnberg, J., Woodward, S. 2018. First report of Pleuroceras pseudoplatani on Acer rubrum, griseum, A. saccharinum, A. negundo, A. circinatum, and A. macrophyllum in Scotland. Forestry Chronicle. 94: 147-150.
- Agostinelli, M., Cleary, M., Martín, J.A., Albrectsen, B., Witzell, J. 2018. Pedunculate oaks (Quercus robur ) differing in vitality as reservoirs for fungal biodiversity. Frontiers in Microbiology 9: 1758
- Tedersoo, L., Drenkhan, R., Anslan, S. Morales-Rodriguez, C., and Cleary, M. 2018 High-throughput identification and diagnostics of pathogens and pests: overview and practical recommendations. Molecular Ecology Resources. 19, 47-76.
- Villari, C., Dowkiw, A., Enderle, R., Ghasemkhani, M., Kirisits, T., Kjaer, E., Marčiulynienė, D., McKinney, L., Metzler, B., Rostgaard Nielsen, L., Pliūra, A., Stener, L-G., Suchockas, V., Rodriguez-Saona, L., Bonello, P., and Cleary, M. 2018. Advanced spectroscopy-based phenotyping offers solutions to the ash dieback epidemic. Nature: Scientific Reports. 8, Article number: 17448 (2018)
- Roy H, Groom Q, Adriaens T, Agnello G, Antic M, Archambeau A, Bacher S, Bonn A, Brown P, Brundu G, López B, Cleary M, Cogălniceanu D, de Groot M, De Sousa T, Deidun A, Essl F, Fišer Pečnikar Ž, Gazda A, Gervasini E, Glavendekic M, Gigot G, Jelaska S, Jeschke J, Kaminski D, Karachle P, Komives T, Lapin K, Lucy F, Marchante E, Marisavljevic D, Marja R, Martín Torrijos L, Martinou A, Matosevic D, Mifsud C, Motiejūnaitė J, Ojaveer H, Pasalic N, Pekárik L, Per E, Pergl J, Pesic V, Pocock M, Reino L, Ries C, Rozylowicz L, Schade S, Sigurdsson S, Steinitz O, Stern N, Teofilovski A, Thorsson J, Tomov R, Tricarico E, Trichkova T, Tsiamis K, van Valkenburg J, Vella N, Verbrugge L, Vétek G, Villaverde C, Witzell J, Zenetos A, Cardoso A (2018) Increasing understanding of alien species through citizen science (Alien-CSI). Research Ideas and Outcomes 4: e31412.
- Cleary, M., Blomquist, M., Vetukuri RR, Böhlenius H, Witzell J. 2017. Susceptibility of common tree species in Sweden to Phytophthora cambivora, P. plurivora and P. cactorum. Forest Pathology 47, 3, e12329.
- Marčiulynienė, D., Davydenko, K., Stenlid, J., and Cleary, M. 2017. Can pruning help maintain vitality of ash trees affected by ash dieback in urban landscapes? Urban Forestry and Urban Greening. 27: 69-75.
- Stenlid, J., Elfstrand, M., Cleary, M., Ihrmark, K., Karlsson, M., Davydenko, K., Brandström-Durling, M. 2017. Genomes of Hymenoscyphus fraxineus and Hymenoscyphus albidus encode surprisingly large cell wall degrading potential, balancing saprotrophic and necrotrophic signatures (PDF). Baltic Forestry. 23: 41-51.
- Prospero, S., and Cleary, M. 2017. (Invited article) Focused Review: Effects of host variability in the spread of invasive forest diseases. Forests. 8, 80.
- Witzell, J., Cleary, M., 2017. Hantering av Phytophthora i sydsvenska lövskogar. SLU, Institutionen för sydsvensk skogsvetenskap. Alnarp 2017. 56 pp.
- Power, M.W.P., Hopkins, A.J.M., Chen, J., Bengtsson, S.B.K., Vasaitis, R., and Cleary, M.R. 2017. European Fraxinus species introduced into New Zealand retain many of their native endophytic fungi (PDF). Baltic Forestry. 23: 74-81.
- Skovsgaard, J-P., Wilhelm, G-J., Thomsen, I.M., Metzler, B., Kirisits, T., Havrdová, L., Enderle, R., Dobrowolska, D., Cleary, M., Clark, J. 2017. Silvicultural strategies for Fraxinus excelsior in response to dieback caused by Hymenoscyphus fraxineus. Forestry. 2017; 90, 455–472
- Grenville-Briggs LJ, Kushwaha SK, Cleary, M., Witzell J, Chawade A, Savenkov E, Whisson SC, Vetukuri RR. 2017. Draft Genome of the Oomycete pathogen Phytophthora cactorum Strain LV007 isolated from European Beech (Fagus sylvatica). Genom Data 12, 155–156
- Cleary, M., Blomquist, M., Ghasemkhani M, Witzell J. 2016. First report of Phytophthora gonapodyides causing stem canker on European beech (Fagus sylvatica) in southern Sweden. Plant Disease. 100:2174.
- Cleary, M., Nguyen, D., Marčiulynienė, D., Berlin, A., Vasaitis, R., Stenlid J. 2016. Friend or foe? Biological and ecological traits of the European ash dieback pathogen Hymenoscyphus fraxineus in its native environment. Nature: Scientific Reports. 6, 21895;
- Nguyen, D. Cleary, M.R., Enderle, R., Stenlid, J. 2016. Analyses of the ash dieback pathogen Hymenoscyphus fraxineus, suggest role of tree species diversity on colonization and population structure differentiation. Forest Pathol 46: 82-84.
- Madigan, A., Bełka, M., Taylor, A., Cleary, M., Nguyen, D., Elfstrand, M., Woodward, S. 2015. Can Hymenoscyphus fraxineus infect other hardy members of the Oleaceae? Forest Pathol. 45: 426-429.
- Cleary, M.R., Andersson, P.F., Broberg, A., Elfstrand, M., Daniel, G. and J. Stenlid. 2014. Genotypes of Fraxinus excelsior with different susceptibility to the ash dieback pathogen Hymenoscyphus fraxineus and their response to the phytotoxin viridiol – a metabolomic and microscopic study. Phytochem. 102: 115-125.
- Rönnberg, J., Berglund, M., Johansson, U., and Cleary., M., 2013. Incidence of Heterobasidion spp. following different thinning practices in Norway spruce. Forest Ecol Manag. 289:409-415.
- Cleary, M.R., Daniel, G., and J. Stenlid. 2013. Light and scanning electron microscopy studies of the early infection stages of Hymenoscyphus fraxineus on Fraxinus excelsior. Plant Pathol. 62: 1294-1301.
- Cleary, M.R., Arhipova, N., Gaitnieks, T., Stenlid, J., and R. Vasaitis. 2013. Natural infection of Fraxinus excelsior seeds by Chalara fraxinea. Forest Pathol. 43:83.
- Andersson, P.F., Bengtsson, S., Cleary, M.R., Stenlid, J., and A. Broberg. 2012. Viridin-like steroids from Hymenoscyphus fraxineus. Phytochemistry. 86: 195-200.
- Rönnberg, J. and Cleary., M., 2012. Presence of Heterobasidion infections in Norway spruce stumps six years after treatment with Phlebiopsis gigantea. Forest Pathol. 42:144-149.